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Competition between Self-Assembly and Phase Separation Governs High-Temperature Condensation of a DNA Liquid
Journal article   Peer reviewed

Competition between Self-Assembly and Phase Separation Governs High-Temperature Condensation of a DNA Liquid

Omkar Hegde, Tianhao Li, Anjali Sharma, Marco Borja, William M. Jacobs and W. Benjamin Rogers
Physical review letters, Vol.132(20), 208401
05/17/2024
Handle:
https://hdl.handle.net/10192/69972
PMID: 38829088

Abstract

Biophysics
In many biopolymer solutions, attractive interactions that stabilize finite-sized clusters at low concentrations also promote phase separation at high concentrations. Here we study a model biopolymer system that exhibits the opposite behavior, whereby self-assembly of DNA oligonucleotides into finite-sized, stoichiometric clusters tends to inhibit phase separation. We first use microfluidics-based experiments to map a novel phase transition in which the oligonucleotides condense as the temperature increases at high concentrations of divalent cations. We then show that a theoretical model of competition between self-assembly and phase separation quantitatively predicts changes in experimental phase diagrams arising from DNA sequence perturbations. Our results point to a general mechanism by which self-assembly shapes phase boundaries in complex biopolymer solutions.
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